From 728ac3a9fddff4ec24a466383eb34197e7066c78 Mon Sep 17 00:00:00 2001
From: toge <toge.mail@gmail.com>
Date: Fri, 19 Dec 2025 02:50:16 +0900
Subject: [PATCH] [htslib] update to 1.23 (#48947)

---
 ports/htslib/portfile.cmake | 2 +-
 ports/htslib/vcpkg.json     | 2 +-
 versions/baseline.json      | 2 +-
 versions/h-/htslib.json     | 5 +++++
 4 files changed, 8 insertions(+), 3 deletions(-)

diff --git a/ports/htslib/portfile.cmake b/ports/htslib/portfile.cmake
index 736bd3f22e..3ca276f9dd 100644
--- a/ports/htslib/portfile.cmake
+++ b/ports/htslib/portfile.cmake
@@ -2,7 +2,7 @@ vcpkg_from_github(
     OUT_SOURCE_PATH SOURCE_PATH
     REPO samtools/htslib
     REF "${VERSION}"
-    SHA512 3537149d4118bf27424845a44fdfdb5ffce2376bf956ba15cd61686b84efa320c66fed76eab2fc381f344d61607f7e63494fdd6ef8cf4e40cdb3ac6fe29f86ad
+    SHA512 bb1a9c03d3b9f113a030c2c36e7c354e60395f7deb9377ca1993e4d26fb1e1df69570a60a5a4696841d29266df1052558eed7ddb877d1248a82103520a695150
     HEAD_REF develop
     PATCHES
         0001-set-linkage.patch
diff --git a/ports/htslib/vcpkg.json b/ports/htslib/vcpkg.json
index a9580190ef..e54fc98022 100644
--- a/ports/htslib/vcpkg.json
+++ b/ports/htslib/vcpkg.json
@@ -1,6 +1,6 @@
 {
   "name": "htslib",
-  "version": "1.22.1",
+  "version": "1.23",
   "description": "C library for high-throughput sequencing data formats",
   "homepage": "https://github.com/samtools/htslib",
   "license": "MIT",
diff --git a/versions/baseline.json b/versions/baseline.json
index 397c8d9526..583b7decac 100644
--- a/versions/baseline.json
+++ b/versions/baseline.json
@@ -3821,7 +3821,7 @@
       "port-version": 0
     },
     "htslib": {
-      "baseline": "1.22.1",
+      "baseline": "1.23",
       "port-version": 0
     },
     "http-parser": {
diff --git a/versions/h-/htslib.json b/versions/h-/htslib.json
index 5df9b8b112..1a0b4af26d 100644
--- a/versions/h-/htslib.json
+++ b/versions/h-/htslib.json
@@ -1,5 +1,10 @@
 {
   "versions": [
+    {
+      "git-tree": "b776c03599b6e6e52bca75dcc040ef91895e7eae",
+      "version": "1.23",
+      "port-version": 0
+    },
     {
       "git-tree": "494ffb1a8f9ed145a2b89295a532c585d22eaa71",
       "version": "1.22.1",